Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.84□□□□□ -0.19
Sec61a1P61620 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.83□□□□□ -0.19
Sec61a1P61620 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sec61a1P61620 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.83□□□□□ -0.2
Sec61a1P61620 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sec61a1P61620 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Gm11950-201ENSMUST00000121615 838 ntBASIC13.82□□□□□ -0.2
Sec61a1P61620 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Gm6623-201ENSMUST00000173570 544 ntBASIC13.82□□□□□ -0.2
Sec61a1P61620 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Sec61a1P61620 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a1P61620 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Gm13186-201ENSMUST00000118031 316 ntBASIC13.81□□□□□ -0.2
Sec61a1P61620 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Gm27704-201ENSMUST00000185094 107 ntBASIC13.81□□□□□ -0.2
Sec61a1P61620 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.81□□□□□ -0.2
Sec61a1P61620 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms