Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Gm12008-201ENSMUST00000117791 755 ntBASIC18.5■□□□□ 0.55
Rhbdl3P58873 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Gm10499-201ENSMUST00000174094 934 ntBASIC18.5■□□□□ 0.55
Rhbdl3P58873 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhbdl3P58873 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm9385-201ENSMUST00000117563 472 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm16198-201ENSMUST00000118766 670 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm13365-201ENSMUST00000121188 973 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.49■□□□□ 0.55
Rhbdl3P58873 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rhbdl3P58873 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm14701-201ENSMUST00000117156 348 ntBASIC18.48■□□□□ 0.55
Rhbdl3P58873 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Rpph1-201ENSMUST00000175096 319 ntBASIC18.48■□□□□ 0.55
Rhbdl3P58873 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.48■□□□□ 0.55
Rhbdl3P58873 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.48■□□□□ 0.55
Rhbdl3P58873 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.47■□□□□ 0.55
Rhbdl3P58873 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.47■□□□□ 0.55
Rhbdl3P58873 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rhbdl3P58873 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms