Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cldn18P56857 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cldn18P56857 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cldn18P56857 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn18P56857 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Gm7862-201ENSMUST00000121461 292 ntBASIC14.02□□□□□ -0.17
Cldn18P56857 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn18P56857 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.02□□□□□ -0.17
Cldn18P56857 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.02□□□□□ -0.17
Cldn18P56857 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.02□□□□□ -0.17
Cldn18P56857 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn18P56857 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Cldn18P56857 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cldn18P56857 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn18P56857 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn18P56857 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.01□□□□□ -0.17
Cldn18P56857 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn18P56857 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Cldn18P56857 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.01□□□□□ -0.17
Cldn18P56857 Gm6089-201ENSMUST00000197666 938 ntBASIC14.01□□□□□ -0.17
Cldn18P56857 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.01□□□□□ -0.17
Cldn18P56857 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn18P56857 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn18P56857 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cldn18P56857 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn18P56857 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Grk6-207ENSMUST00000225925 2769 ntBASIC14□□□□□ -0.17
Cldn18P56857 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14□□□□□ -0.17
Cldn18P56857 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn18P56857 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn18P56857 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14□□□□□ -0.17
Cldn18P56857 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cldn18P56857 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14□□□□□ -0.17
Cldn18P56857 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14□□□□□ -0.17
Cldn18P56857 AC161829.1-201ENSMUST00000220298 281 ntBASIC14□□□□□ -0.17
Cldn18P56857 AC159106.1-201ENSMUST00000224421 690 ntBASIC14□□□□□ -0.17
Cldn18P56857 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn18P56857 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn18P56857 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn18P56857 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn18P56857 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cldn18P56857 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cldn18P56857 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldn18P56857 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn18P56857 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn18P56857 Gm15358-201ENSMUST00000119249 520 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms