Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf5P56477 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Irf5P56477 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Irf5P56477 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Irf5P56477 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Irf5P56477 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Irf5P56477 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Gm14822-201ENSMUST00000122247 291 ntBASIC18.53■□□□□ 0.56
Irf5P56477 Gm11780-201ENSMUST00000136880 516 ntBASIC18.53■□□□□ 0.56
Irf5P56477 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.53■□□□□ 0.56
Irf5P56477 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.53■□□□□ 0.56
Irf5P56477 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.53■□□□□ 0.56
Irf5P56477 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Irf5P56477 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Irf5P56477 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf5P56477 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Gm13036-201ENSMUST00000117799 748 ntBASIC18.52■□□□□ 0.56
Irf5P56477 Gm8097-201ENSMUST00000117903 829 ntBASIC18.52■□□□□ 0.56
Irf5P56477 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.52■□□□□ 0.56
Irf5P56477 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Irf5P56477 Gm27628-201ENSMUST00000184911 107 ntBASIC18.52■□□□□ 0.56
Irf5P56477 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.52■□□□□ 0.56
Irf5P56477 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Irf5P56477 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Irf5P56477 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Irf5P56477 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Irf5P56477 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
Irf5P56477 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.51■□□□□ 0.55
Irf5P56477 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.51■□□□□ 0.55
Irf5P56477 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf5P56477 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf5P56477 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Irf5P56477 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Irf5P56477 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf5P56477 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Irf5P56477 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.5■□□□□ 0.55
Irf5P56477 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Irf5P56477 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Irf5P56477 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.5■□□□□ 0.55
Irf5P56477 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Irf5P56477 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Gm7222-201ENSMUST00000117512 906 ntBASIC18.5■□□□□ 0.55
Irf5P56477 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.5■□□□□ 0.55
Irf5P56477 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.5■□□□□ 0.55
Irf5P56477 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.5■□□□□ 0.55
Irf5P56477 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Irf5P56477 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf5P56477 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Irf5P56477 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Irf5P56477 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms