Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab4aP56371 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab4aP56371 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab4aP56371 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab4aP56371 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab4aP56371 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab4aP56371 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rab4aP56371 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.39□□□□□ -0.43
Rab4aP56371 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab4aP56371 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rab4aP56371 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rab4aP56371 Gm7514-201ENSMUST00000209475 934 ntBASIC12.39□□□□□ -0.43
Rab4aP56371 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rab4aP56371 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.39□□□□□ -0.43
Rab4aP56371 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab4aP56371 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab4aP56371 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rab4aP56371 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.38□□□□□ -0.43
Rab4aP56371 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rab4aP56371 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.38□□□□□ -0.43
Rab4aP56371 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab4aP56371 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab4aP56371 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rab4aP56371 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab4aP56371 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms