Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdh5P55284 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdh5P55284 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdh5P55284 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.3■□□□□ 0.04
Cdh5P55284 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh5P55284 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Cdh5P55284 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh5P55284 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.29■□□□□ 0.04
Cdh5P55284 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh5P55284 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh5P55284 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdh5P55284 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdh5P55284 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.29■□□□□ 0.04
Cdh5P55284 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.29■□□□□ 0.04
Cdh5P55284 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.29■□□□□ 0.04
Cdh5P55284 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh5P55284 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdh5P55284 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Gm27742-201ENSMUST00000184667 60 ntBASIC15.28■□□□□ 0.04
Cdh5P55284 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdh5P55284 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.28■□□□□ 0.04
Cdh5P55284 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdh5P55284 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh5P55284 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdh5P55284 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Gm44450-201ENSMUST00000199528 114 ntBASIC15.27■□□□□ 0.04
Cdh5P55284 Gm18421-201ENSMUST00000204122 625 ntBASIC15.27■□□□□ 0.04
Cdh5P55284 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.27■□□□□ 0.04
Cdh5P55284 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh5P55284 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdh5P55284 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms