Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.02□□□□□ -0.16
Abcd3P55096 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd3P55096 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Abcd3P55096 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Abcd3P55096 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Abcd3P55096 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm14859-201ENSMUST00000117752 357 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.02□□□□□ -0.17
Abcd3P55096 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm8825-201ENSMUST00000182565 998 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm4518-201ENSMUST00000182638 718 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.02□□□□□ -0.17
Abcd3P55096 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.02□□□□□ -0.17
Abcd3P55096 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Abcd3P55096 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Abcd3P55096 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.02□□□□□ -0.17
Abcd3P55096 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd3P55096 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Abcd3P55096 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.01□□□□□ -0.17
Abcd3P55096 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.01□□□□□ -0.17
Abcd3P55096 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.01□□□□□ -0.17
Abcd3P55096 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd3P55096 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Abcd3P55096 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14□□□□□ -0.17
Abcd3P55096 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14□□□□□ -0.17
Abcd3P55096 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Abcd3P55096 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14□□□□□ -0.17
Abcd3P55096 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Abcd3P55096 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14□□□□□ -0.17
Abcd3P55096 Gm27867-201ENSMUST00000184778 125 ntBASIC14□□□□□ -0.17
Abcd3P55096 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14□□□□□ -0.17
Abcd3P55096 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14□□□□□ -0.17
Abcd3P55096 AC153889.1-201ENSMUST00000219257 330 ntBASIC14□□□□□ -0.17
Abcd3P55096 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abcd3P55096 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms