Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Gm11764-201ENSMUST00000120221 623 ntBASIC15.53■□□□□ 0.08
Atxn1P54254 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Atxn1P54254 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.53■□□□□ 0.08
Atxn1P54254 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.53■□□□□ 0.08
Atxn1P54254 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.53■□□□□ 0.08
Atxn1P54254 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Atxn1P54254 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atxn1P54254 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Atxn1P54254 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.52■□□□□ 0.08
Atxn1P54254 Mir1895-201ENSMUST00000122615 79 ntBASIC15.52■□□□□ 0.08
Atxn1P54254 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.52■□□□□ 0.08
Atxn1P54254 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Gm27494-201ENSMUST00000184735 189 ntBASIC15.52■□□□□ 0.08
Atxn1P54254 Gm9172-201ENSMUST00000212092 954 ntBASIC15.52■□□□□ 0.08
Atxn1P54254 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.52■□□□□ 0.08
Atxn1P54254 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.52■□□□□ 0.08
Atxn1P54254 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Atxn1P54254 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atxn1P54254 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
Atxn1P54254 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
Atxn1P54254 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atxn1P54254 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atxn1P54254 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atxn1P54254 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Atxn1P54254 Gm5682-201ENSMUST00000173402 505 ntBASIC15.51■□□□□ 0.07
Atxn1P54254 Gm44492-201ENSMUST00000197012 141 ntBASIC15.51■□□□□ 0.07
Atxn1P54254 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.51■□□□□ 0.07
Atxn1P54254 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.51■□□□□ 0.07
Atxn1P54254 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Atxn1P54254 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Atxn1P54254 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atxn1P54254 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Atxn1P54254 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Dancr-204ENSMUST00000132389 2347 ntBASIC15.5■□□□□ 0.07
Atxn1P54254 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Atxn1P54254 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Atxn1P54254 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.5■□□□□ 0.07
Atxn1P54254 Gm11424-201ENSMUST00000121929 829 ntBASIC15.5■□□□□ 0.07
Atxn1P54254 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atxn1P54254 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms