Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fdft1P53798 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fdft1P53798 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fdft1P53798 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fdft1P53798 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.66■□□□□ 0.1
Fdft1P53798 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Fdft1P53798 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.66■□□□□ 0.1
Fdft1P53798 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Fdft1P53798 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Fdft1P53798 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Fdft1P53798 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fdft1P53798 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.65■□□□□ 0.1
Fdft1P53798 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Fdft1P53798 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Fdft1P53798 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.65■□□□□ 0.1
Fdft1P53798 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Fdft1P53798 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.65■□□□□ 0.1
Fdft1P53798 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Fdft1P53798 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Fdft1P53798 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fdft1P53798 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.64■□□□□ 0.09
Fdft1P53798 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.64■□□□□ 0.09
Fdft1P53798 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Fdft1P53798 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Fdft1P53798 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Fdft1P53798 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.64■□□□□ 0.09
Fdft1P53798 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fdft1P53798 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Fdft1P53798 App-207ENSMUST00000227737 2827 ntBASIC15.63■□□□□ 0.09
Fdft1P53798 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Fdft1P53798 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Fdft1P53798 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Fdft1P53798 Olfr129-201ENSMUST00000122318 993 ntBASIC15.63■□□□□ 0.09
Fdft1P53798 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Fdft1P53798 Gm27742-201ENSMUST00000184667 60 ntBASIC15.63■□□□□ 0.09
Fdft1P53798 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Fdft1P53798 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.63■□□□□ 0.09
Fdft1P53798 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fdft1P53798 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms