Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sox3P53784 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.01□□□□□ -0.01
Sox3P53784 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.01□□□□□ -0.01
Sox3P53784 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.01□□□□□ -0.01
Sox3P53784 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox3P53784 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.01□□□□□ -0.01
Sox3P53784 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sox3P53784 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Sox3P53784 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox3P53784 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox3P53784 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Sox3P53784 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Sox3P53784 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15□□□□□ -0.01
Sox3P53784 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Gm13418-201ENSMUST00000119097 944 ntBASIC15□□□□□ -0.01
Sox3P53784 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15□□□□□ -0.01
Sox3P53784 Gm29707-201ENSMUST00000196325 491 ntBASIC15□□□□□ -0.01
Sox3P53784 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15□□□□□ -0.01
Sox3P53784 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15□□□□□ -0.01
Sox3P53784 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15□□□□□ -0.01
Sox3P53784 AV026068-213ENSMUST00000223675 1171 ntBASIC15□□□□□ -0.01
Sox3P53784 AC107711.5-202ENSMUST00000226429 702 ntBASIC15□□□□□ -0.01
Sox3P53784 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Sox3P53784 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox3P53784 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox3P53784 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Gm15173-201ENSMUST00000122049 433 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Gm4535-201ENSMUST00000182274 558 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.99□□□□□ -0.01
Sox3P53784 Gm27000-201ENSMUST00000182943 842 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Sox3P53784 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Gm10355-201ENSMUST00000097146 517 ntBASIC14.99□□□□□ -0.01
Sox3P53784 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox3P53784 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox3P53784 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms