Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.55■□□□□ 0.24
Shmt1P50431 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.55■□□□□ 0.24
Shmt1P50431 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.55■□□□□ 0.24
Shmt1P50431 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.55■□□□□ 0.24
Shmt1P50431 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shmt1P50431 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt1P50431 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Gm13036-201ENSMUST00000117799 748 ntBASIC16.54■□□□□ 0.24
Shmt1P50431 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.54■□□□□ 0.24
Shmt1P50431 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.54■□□□□ 0.24
Shmt1P50431 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shmt1P50431 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Shmt1P50431 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Shmt1P50431 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Shmt1P50431 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.54■□□□□ 0.24
Shmt1P50431 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shmt1P50431 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.53■□□□□ 0.24
Shmt1P50431 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.53■□□□□ 0.24
Shmt1P50431 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.53■□□□□ 0.24
Shmt1P50431 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.53■□□□□ 0.24
Shmt1P50431 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.53■□□□□ 0.24
Shmt1P50431 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shmt1P50431 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shmt1P50431 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.52■□□□□ 0.24
Shmt1P50431 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Gm27628-201ENSMUST00000184911 107 ntBASIC16.52■□□□□ 0.24
Shmt1P50431 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.52■□□□□ 0.24
Shmt1P50431 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.52■□□□□ 0.24
Shmt1P50431 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shmt1P50431 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Shmt1P50431 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shmt1P50431 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shmt1P50431 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shmt1P50431 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.51■□□□□ 0.23
Shmt1P50431 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shmt1P50431 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shmt1P50431 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms