Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
LtbrP50284 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LtbrP50284 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 Mir6977-201ENSMUST00000184960 64 ntBASIC18.34■□□□□ 0.53
LtbrP50284 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.34■□□□□ 0.53
LtbrP50284 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.34■□□□□ 0.53
LtbrP50284 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LtbrP50284 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.34■□□□□ 0.53
LtbrP50284 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.34■□□□□ 0.53
LtbrP50284 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LtbrP50284 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LtbrP50284 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbrP50284 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LtbrP50284 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LtbrP50284 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LtbrP50284 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.33■□□□□ 0.52
LtbrP50284 Gm15427-201ENSMUST00000117288 531 ntBASIC18.33■□□□□ 0.52
LtbrP50284 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.33■□□□□ 0.52
LtbrP50284 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.33■□□□□ 0.52
LtbrP50284 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.33■□□□□ 0.52
LtbrP50284 Gm43474-201ENSMUST00000196415 774 ntBASIC18.33■□□□□ 0.52
LtbrP50284 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.33■□□□□ 0.52
LtbrP50284 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.33■□□□□ 0.52
LtbrP50284 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.33■□□□□ 0.52
LtbrP50284 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LtbrP50284 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.32■□□□□ 0.52
LtbrP50284 Gm11745-201ENSMUST00000121669 448 ntBASIC18.32■□□□□ 0.52
LtbrP50284 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Mir6990-201ENSMUST00000183724 91 ntBASIC18.32■□□□□ 0.52
LtbrP50284 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.32■□□□□ 0.52
LtbrP50284 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LtbrP50284 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.32■□□□□ 0.52
LtbrP50284 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LtbrP50284 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LtbrP50284 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.31■□□□□ 0.52
LtbrP50284 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LtbrP50284 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LtbrP50284 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.31■□□□□ 0.52
LtbrP50284 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LtbrP50284 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.31■□□□□ 0.52
LtbrP50284 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.31■□□□□ 0.52
LtbrP50284 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Gm22175-201ENSMUST00000175007 78 ntBASIC18.31■□□□□ 0.52
LtbrP50284 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Gm45747-201ENSMUST00000212203 999 ntBASIC18.31■□□□□ 0.52
LtbrP50284 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbrP50284 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LtbrP50284 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms