Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.02□□□□□ -0.32
Nkx2-1P50220 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-1P50220 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Gm27463-201ENSMUST00000183569 57 ntBASIC13.02□□□□□ -0.33
Nkx2-1P50220 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.02□□□□□ -0.33
Nkx2-1P50220 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-1P50220 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Gm18421-201ENSMUST00000204122 625 ntBASIC13.01□□□□□ -0.33
Nkx2-1P50220 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Nkx2-1P50220 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-1P50220 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Nkx2-1P50220 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-1P50220 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13□□□□□ -0.33
Nkx2-1P50220 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-1P50220 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Gm43352-201ENSMUST00000196419 3065 ntBASIC13□□□□□ -0.33
Nkx2-1P50220 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx2-1P50220 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-1P50220 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-1P50220 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms