Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.98□□□□□ -0.01
Sox18P43680 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox18P43680 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC14.98□□□□□ -0.01
Sox18P43680 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox18P43680 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.98□□□□□ -0.01
Sox18P43680 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.97□□□□□ -0.01
Sox18P43680 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox18P43680 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Sox18P43680 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sox18P43680 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox18P43680 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox18P43680 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox18P43680 Mir6404-201ENSMUST00000183699 94 ntBASIC14.97□□□□□ -0.01
Sox18P43680 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.97□□□□□ -0.01
Sox18P43680 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sox18P43680 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox18P43680 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox18P43680 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox18P43680 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox18P43680 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sox18P43680 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.96□□□□□ -0.01
Sox18P43680 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sox18P43680 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Mir449b-201ENSMUST00000104833 80 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Rprl2-201ENSMUST00000157150 290 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox18P43680 Gm18889-201ENSMUST00000174284 929 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm5866-201ENSMUST00000177881 973 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm4518-201ENSMUST00000182638 718 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.96□□□□□ -0.01
Sox18P43680 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sox18P43680 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.96□□□□□ -0.01
Sox18P43680 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.96□□□□□ -0.01
Sox18P43680 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms