Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Gm9385-201ENSMUST00000117563 472 ntBASIC14.83□□□□□ -0.04
Cdx2P43241 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdx2P43241 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdx2P43241 Rpph1-201ENSMUST00000175096 319 ntBASIC14.83□□□□□ -0.04
Cdx2P43241 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.83□□□□□ -0.04
Cdx2P43241 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdx2P43241 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdx2P43241 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdx2P43241 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdx2P43241 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdx2P43241 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdx2P43241 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx2P43241 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Gm12008-201ENSMUST00000117791 755 ntBASIC14.82□□□□□ -0.04
Cdx2P43241 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdx2P43241 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cdx2P43241 Gm5186-201ENSMUST00000218781 920 ntBASIC14.82□□□□□ -0.04
Cdx2P43241 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.82□□□□□ -0.04
Cdx2P43241 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdx2P43241 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.82□□□□□ -0.04
Cdx2P43241 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx2P43241 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.81□□□□□ -0.04
Cdx2P43241 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdx2P43241 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdx2P43241 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdx2P43241 Mir7023-201ENSMUST00000185093 64 ntBASIC14.81□□□□□ -0.04
Cdx2P43241 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdx2P43241 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.81□□□□□ -0.04
Cdx2P43241 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdx2P43241 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdx2P43241 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdx2P43241 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdx2P43241 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.81□□□□□ -0.04
Cdx2P43241 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdx2P43241 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdx2P43241 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdx2P43241 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdx2P43241 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Mir449b-201ENSMUST00000104833 80 ntBASIC14.8□□□□□ -0.04
Cdx2P43241 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdx2P43241 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdx2P43241 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cdx2P43241 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdx2P43241 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms