Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gdf6P43028 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Gdf6P43028 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.44■□□□□ 0.22
Gdf6P43028 Gm25911-201ENSMUST00000157621 56 ntBASIC16.44■□□□□ 0.22
Gdf6P43028 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.44■□□□□ 0.22
Gdf6P43028 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.44■□□□□ 0.22
Gdf6P43028 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.44■□□□□ 0.22
Gdf6P43028 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.44■□□□□ 0.22
Gdf6P43028 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gdf6P43028 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.43■□□□□ 0.22
Gdf6P43028 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gdf6P43028 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Gdf6P43028 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Mir8117-201ENSMUST00000184773 107 ntBASIC16.43■□□□□ 0.22
Gdf6P43028 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gdf6P43028 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gdf6P43028 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Gm13597-201ENSMUST00000121239 375 ntBASIC16.42■□□□□ 0.22
Gdf6P43028 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Gdf6P43028 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.42■□□□□ 0.22
Gdf6P43028 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.42■□□□□ 0.22
Gdf6P43028 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gdf6P43028 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gdf6P43028 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.41■□□□□ 0.22
Gdf6P43028 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Gm14822-201ENSMUST00000122247 291 ntBASIC16.41■□□□□ 0.22
Gdf6P43028 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 Gm27397-201ENSMUST00000184997 107 ntBASIC16.41■□□□□ 0.22
Gdf6P43028 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Gm43575-201ENSMUST00000196420 516 ntBASIC16.41■□□□□ 0.22
Gdf6P43028 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.41■□□□□ 0.22
Gdf6P43028 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms