Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.82■□□□□ 0.12
Fen1P39749 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.82■□□□□ 0.12
Fen1P39749 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Fen1P39749 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fen1P39749 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.81■□□□□ 0.12
Fen1P39749 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.81■□□□□ 0.12
Fen1P39749 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Gm7370-201ENSMUST00000219471 767 ntBASIC15.81■□□□□ 0.12
Fen1P39749 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.81■□□□□ 0.12
Fen1P39749 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.81■□□□□ 0.12
Fen1P39749 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Fen1P39749 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fen1P39749 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Fen1P39749 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Fen1P39749 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.8■□□□□ 0.12
Fen1P39749 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Fen1P39749 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Fen1P39749 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.8■□□□□ 0.12
Fen1P39749 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Fen1P39749 Gm11336-201ENSMUST00000118168 334 ntBASIC15.8■□□□□ 0.12
Fen1P39749 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Fen1P39749 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Fen1P39749 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Fen1P39749 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Fen1P39749 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fen1P39749 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Fen1P39749 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Fen1P39749 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Fen1P39749 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.79■□□□□ 0.12
Fen1P39749 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fen1P39749 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fen1P39749 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Fen1P39749 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fen1P39749 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms