Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LdlrP35951 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.61■□□□□ 0.09
LdlrP35951 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LdlrP35951 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.61■□□□□ 0.09
LdlrP35951 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LdlrP35951 Mzt1-203ENSMUST00000227948 952 ntBASIC15.61■□□□□ 0.09
LdlrP35951 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LdlrP35951 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LdlrP35951 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LdlrP35951 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LdlrP35951 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.6■□□□□ 0.09
LdlrP35951 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.6■□□□□ 0.09
LdlrP35951 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.6■□□□□ 0.09
LdlrP35951 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.6■□□□□ 0.09
LdlrP35951 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LdlrP35951 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.6■□□□□ 0.09
LdlrP35951 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LdlrP35951 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.59■□□□□ 0.09
LdlrP35951 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LdlrP35951 Gm43514-201ENSMUST00000198852 424 ntBASIC15.59■□□□□ 0.09
LdlrP35951 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
LdlrP35951 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LdlrP35951 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LdlrP35951 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LdlrP35951 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LdlrP35951 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LdlrP35951 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LdlrP35951 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Gm6623-201ENSMUST00000173570 544 ntBASIC15.58■□□□□ 0.08
LdlrP35951 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.58■□□□□ 0.08
LdlrP35951 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.58■□□□□ 0.08
LdlrP35951 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.58■□□□□ 0.08
LdlrP35951 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LdlrP35951 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.57■□□□□ 0.08
LdlrP35951 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Gm34391-201ENSMUST00000203706 907 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms