Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Thbs1P35441 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.48□□□□□ -0.09
Thbs1P35441 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.48□□□□□ -0.09
Thbs1P35441 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.48□□□□□ -0.09
Thbs1P35441 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.48□□□□□ -0.09
Thbs1P35441 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.48□□□□□ -0.09
Thbs1P35441 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.48□□□□□ -0.09
Thbs1P35441 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thbs1P35441 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Thbs1P35441 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Thbs1P35441 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Thbs1P35441 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Thbs1P35441 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.47□□□□□ -0.09
Thbs1P35441 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Thbs1P35441 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Thbs1P35441 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Thbs1P35441 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm8825-201ENSMUST00000182565 998 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm4518-201ENSMUST00000182638 718 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm27357-201ENSMUST00000183754 135 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.47□□□□□ -0.09
Thbs1P35441 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thbs1P35441 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.46□□□□□ -0.09
Thbs1P35441 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.46□□□□□ -0.09
Thbs1P35441 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm17807-201ENSMUST00000186869 298 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm18669-201ENSMUST00000216049 778 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Thbs1P35441 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.46□□□□□ -0.09
Thbs1P35441 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thbs1P35441 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Thbs1P35441 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Thbs1P35441 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thbs1P35441 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms