Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.82□□□□□ -0.36
Rab5cP35278 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab5cP35278 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rab5cP35278 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab5cP35278 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Rab5cP35278 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rab5cP35278 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab5cP35278 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab5cP35278 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.82□□□□□ -0.36
Rab5cP35278 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rab5cP35278 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab5cP35278 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rab5cP35278 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab5cP35278 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab5cP35278 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm10517-202ENSMUST00000192970 758 ntBASIC12.81□□□□□ -0.36
Rab5cP35278 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.81□□□□□ -0.36
Rab5cP35278 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rab5cP35278 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.81□□□□□ -0.36
Rab5cP35278 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.81□□□□□ -0.36
Rab5cP35278 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab5cP35278 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.8□□□□□ -0.36
Rab5cP35278 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.8□□□□□ -0.36
Rab5cP35278 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.8□□□□□ -0.36
Rab5cP35278 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Rab5cP35278 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.8□□□□□ -0.36
Rab5cP35278 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.8□□□□□ -0.36
Rab5cP35278 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab5cP35278 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab5cP35278 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab5cP35278 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab5cP35278 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab5cP35278 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms