Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Slc6a11P31650 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Slc6a11P31650 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.89□□□□□ -0.03
Slc6a11P31650 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Slc6a11P31650 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a11P31650 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.89□□□□□ -0.03
Slc6a11P31650 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.88□□□□□ -0.03
Slc6a11P31650 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Slc6a11P31650 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Slc6a11P31650 Gm37722-201ENSMUST00000193757 208 ntBASIC14.88□□□□□ -0.03
Slc6a11P31650 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.88□□□□□ -0.03
Slc6a11P31650 Gm34391-201ENSMUST00000203706 907 ntBASIC14.88□□□□□ -0.03
Slc6a11P31650 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.88□□□□□ -0.03
Slc6a11P31650 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a11P31650 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.87□□□□□ -0.03
Slc6a11P31650 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.87□□□□□ -0.03
Slc6a11P31650 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a11P31650 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a11P31650 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Gm5864-201ENSMUST00000202263 970 ntBASIC14.86□□□□□ -0.03
Slc6a11P31650 Birc2-201ENSMUST00000054878 378 ntBASIC14.86□□□□□ -0.03
Slc6a11P31650 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms