Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.52□□□□□ -0.25
Slc6a1P31648 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a1P31648 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a1P31648 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a1P31648 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.51□□□□□ -0.25
Slc6a1P31648 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Slc6a1P31648 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.51□□□□□ -0.25
Slc6a1P31648 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a1P31648 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Slc6a1P31648 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a1P31648 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.51□□□□□ -0.25
Slc6a1P31648 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a1P31648 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a1P31648 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms