Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Gm12497-201ENSMUST00000138778 237 ntBASIC14.19□□□□□ -0.14
VtnP29788 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.19□□□□□ -0.14
VtnP29788 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.19□□□□□ -0.14
VtnP29788 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.19□□□□□ -0.14
VtnP29788 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VtnP29788 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.18□□□□□ -0.14
VtnP29788 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VtnP29788 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
VtnP29788 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.18□□□□□ -0.14
VtnP29788 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.18□□□□□ -0.14
VtnP29788 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.18□□□□□ -0.14
VtnP29788 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VtnP29788 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.17□□□□□ -0.14
VtnP29788 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VtnP29788 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VtnP29788 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.17□□□□□ -0.14
VtnP29788 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.17□□□□□ -0.14
VtnP29788 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.17□□□□□ -0.14
VtnP29788 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VtnP29788 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VtnP29788 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VtnP29788 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.16□□□□□ -0.14
VtnP29788 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.16□□□□□ -0.14
VtnP29788 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
VtnP29788 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.16□□□□□ -0.14
VtnP29788 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Mir5131-201ENSMUST00000175426 93 ntBASIC14.16□□□□□ -0.14
VtnP29788 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VtnP29788 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.16□□□□□ -0.14
VtnP29788 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.16□□□□□ -0.14
VtnP29788 Gm18206-201ENSMUST00000207027 926 ntBASIC14.16□□□□□ -0.14
VtnP29788 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.16□□□□□ -0.14
VtnP29788 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VtnP29788 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms