Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.56□□□□□ -0.08
Nedd8P29595 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Nedd8P29595 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.55□□□□□ -0.08
Nedd8P29595 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Nedd8P29595 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd8P29595 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.54□□□□□ -0.08
Nedd8P29595 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.54□□□□□ -0.08
Nedd8P29595 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nedd8P29595 Gm37292-201ENSMUST00000192062 758 ntBASIC14.54□□□□□ -0.08
Nedd8P29595 AV356131-201ENSMUST00000206201 750 ntBASIC14.54□□□□□ -0.08
Nedd8P29595 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Nedd8P29595 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd8P29595 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nedd8P29595 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.53□□□□□ -0.08
Nedd8P29595 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Nedd8P29595 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.53□□□□□ -0.08
Nedd8P29595 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nedd8P29595 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd8P29595 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
Nedd8P29595 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nedd8P29595 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Nedd8P29595 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nedd8P29595 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nedd8P29595 Gm13148-201ENSMUST00000118892 745 ntBASIC14.52□□□□□ -0.09
Nedd8P29595 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.52□□□□□ -0.09
Nedd8P29595 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nedd8P29595 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms