Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.94■□□□□ 0.46
Vcam1P29533 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.94■□□□□ 0.46
Vcam1P29533 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.94■□□□□ 0.46
Vcam1P29533 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.94■□□□□ 0.46
Vcam1P29533 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.94■□□□□ 0.46
Vcam1P29533 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcam1P29533 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vcam1P29533 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.93■□□□□ 0.46
Vcam1P29533 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.93■□□□□ 0.46
Vcam1P29533 Gm14701-201ENSMUST00000117156 348 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Gm9385-201ENSMUST00000117563 472 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Gm16198-201ENSMUST00000118766 670 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.93■□□□□ 0.46
Vcam1P29533 Gm13365-201ENSMUST00000121188 973 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Vcam1P29533 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.93■□□□□ 0.46
Vcam1P29533 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.93■□□□□ 0.46
Vcam1P29533 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vcam1P29533 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vcam1P29533 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.93■□□□□ 0.46
Vcam1P29533 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.93■□□□□ 0.46
Vcam1P29533 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcam1P29533 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.92■□□□□ 0.46
Vcam1P29533 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.92■□□□□ 0.46
Vcam1P29533 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vcam1P29533 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vcam1P29533 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Gm11745-201ENSMUST00000121669 448 ntBASIC17.92■□□□□ 0.46
Vcam1P29533 Rpph1-201ENSMUST00000175096 319 ntBASIC17.92■□□□□ 0.46
Vcam1P29533 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.92■□□□□ 0.46
Vcam1P29533 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.92■□□□□ 0.46
Vcam1P29533 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Vcam1P29533 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Vcam1P29533 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vcam1P29533 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Vcam1P29533 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vcam1P29533 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.91■□□□□ 0.46
Vcam1P29533 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
Vcam1P29533 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Vcam1P29533 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.91■□□□□ 0.46
Vcam1P29533 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Vcam1P29533 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.91■□□□□ 0.46
Vcam1P29533 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.91■□□□□ 0.46
Vcam1P29533 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vcam1P29533 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.91■□□□□ 0.46
Vcam1P29533 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.91■□□□□ 0.46
Vcam1P29533 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms