Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aldh1a1P24549 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.77■□□□□ 0.28
Aldh1a1P24549 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Gm5745-201ENSMUST00000183748 313 ntBASIC16.77■□□□□ 0.28
Aldh1a1P24549 Gm2272-201ENSMUST00000194903 582 ntBASIC16.77■□□□□ 0.28
Aldh1a1P24549 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aldh1a1P24549 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aldh1a1P24549 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Gm25287-201ENSMUST00000103846 110 ntBASIC16.76■□□□□ 0.27
Aldh1a1P24549 Gm22918-201ENSMUST00000103855 110 ntBASIC16.76■□□□□ 0.27
Aldh1a1P24549 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Aldh1a1P24549 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.75■□□□□ 0.27
Aldh1a1P24549 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.75■□□□□ 0.27
Aldh1a1P24549 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.75■□□□□ 0.27
Aldh1a1P24549 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.75■□□□□ 0.27
Aldh1a1P24549 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aldh1a1P24549 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Gm23547-201ENSMUST00000158210 271 ntBASIC16.74■□□□□ 0.27
Aldh1a1P24549 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Aldh1a1P24549 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Aldh1a1P24549 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms