Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.1■□□□□ 0.33
Pde6bP23440 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.1■□□□□ 0.33
Pde6bP23440 Gm27397-201ENSMUST00000184997 107 ntBASIC17.1■□□□□ 0.33
Pde6bP23440 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.1■□□□□ 0.33
Pde6bP23440 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pde6bP23440 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.1■□□□□ 0.33
Pde6bP23440 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
Pde6bP23440 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pde6bP23440 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pde6bP23440 Gm11764-201ENSMUST00000120221 623 ntBASIC17.09■□□□□ 0.33
Pde6bP23440 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.09■□□□□ 0.33
Pde6bP23440 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.09■□□□□ 0.33
Pde6bP23440 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Gm24513-201ENSMUST00000174964 138 ntBASIC17.09■□□□□ 0.33
Pde6bP23440 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pde6bP23440 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pde6bP23440 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pde6bP23440 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.09■□□□□ 0.33
Pde6bP23440 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6bP23440 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pde6bP23440 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.08■□□□□ 0.33
Pde6bP23440 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.08■□□□□ 0.33
Pde6bP23440 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Pde6bP23440 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Pde6bP23440 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6bP23440 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.08■□□□□ 0.32
Pde6bP23440 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.08■□□□□ 0.32
Pde6bP23440 Gm27646-201ENSMUST00000183989 110 ntBASIC17.08■□□□□ 0.32
Pde6bP23440 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.08■□□□□ 0.32
Pde6bP23440 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pde6bP23440 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6bP23440 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.07■□□□□ 0.32
Pde6bP23440 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.07■□□□□ 0.32
Pde6bP23440 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
Pde6bP23440 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.07■□□□□ 0.32
Pde6bP23440 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.07■□□□□ 0.32
Pde6bP23440 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pde6bP23440 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
Pde6bP23440 Haglr-201ENSMUST00000100000 2085 ntBASIC17.07■□□□□ 0.32
Pde6bP23440 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pde6bP23440 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.07■□□□□ 0.32
Pde6bP23440 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6bP23440 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pde6bP23440 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pde6bP23440 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms