Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm14822-201ENSMUST00000122247 291 ntBASIC12.8□□□□□ -0.36
Tnfrsf9P20334 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gm10576-201ENSMUST00000191927 825 ntBASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gm18421-201ENSMUST00000204122 625 ntBASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf9P20334 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gm4995-201ENSMUST00000117247 432 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gm15173-201ENSMUST00000122049 433 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Psmb5-202ENSMUST00000227257 622 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gm15590-201ENSMUST00000078419 552 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf9P20334 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gm44450-201ENSMUST00000199528 114 ntBASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf9P20334 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf9P20334 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf9P20334 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf9P20334 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf9P20334 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf9P20334 Gm27397-201ENSMUST00000184997 107 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms