Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Cdx1P18111 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm12085-201ENSMUST00000119263 940 ntBASIC12.7□□□□□ -0.38
Cdx1P18111 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdx1P18111 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.7□□□□□ -0.38
Cdx1P18111 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm7367-201ENSMUST00000057611 492 ntBASIC12.7□□□□□ -0.38
Cdx1P18111 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdx1P18111 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdx1P18111 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdx1P18111 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdx1P18111 App-207ENSMUST00000227737 2827 ntBASIC12.7□□□□□ -0.38
Cdx1P18111 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx1P18111 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx1P18111 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdx1P18111 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdx1P18111 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 Gm18032-201ENSMUST00000222541 538 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx1P18111 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.69□□□□□ -0.38
Cdx1P18111 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdx1P18111 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx1P18111 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdx1P18111 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx1P18111 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdx1P18111 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdx1P18111 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdx1P18111 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Gm23634-201ENSMUST00000175071 91 ntBASIC12.68□□□□□ -0.38
Cdx1P18111 Mir5130-201ENSMUST00000175160 84 ntBASIC12.68□□□□□ -0.38
Cdx1P18111 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdx1P18111 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cdx1P18111 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx1P18111 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms