Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm15039-201ENSMUST00000118914 875 ntBASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm37055-201ENSMUST00000191866 133 ntBASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm45058-201ENSMUST00000205810 766 ntBASIC12.99□□□□□ -0.33
Cxcl1P12850 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl1P12850 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.99□□□□□ -0.33
Cxcl1P12850 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl1P12850 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl1P12850 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.98□□□□□ -0.33
Cxcl1P12850 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Gm27389-201ENSMUST00000183622 195 ntBASIC12.98□□□□□ -0.33
Cxcl1P12850 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.98□□□□□ -0.33
Cxcl1P12850 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cxcl1P12850 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl1P12850 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.97□□□□□ -0.33
Cxcl1P12850 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.97□□□□□ -0.33
Cxcl1P12850 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.97□□□□□ -0.33
Cxcl1P12850 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl1P12850 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl1P12850 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms