Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a2P08122 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a2P08122 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.46□□□□□ -0.1
Col4a2P08122 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.46□□□□□ -0.1
Col4a2P08122 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Col4a2P08122 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a2P08122 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col4a2P08122 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a2P08122 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a2P08122 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.46□□□□□ -0.1
Col4a2P08122 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col4a2P08122 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col4a2P08122 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Col4a2P08122 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.45□□□□□ -0.1
Col4a2P08122 Gm9385-201ENSMUST00000117563 472 ntBASIC14.45□□□□□ -0.1
Col4a2P08122 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a2P08122 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col4a2P08122 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.45□□□□□ -0.1
Col4a2P08122 Gm7774-201ENSMUST00000200064 533 ntBASIC14.45□□□□□ -0.1
Col4a2P08122 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a2P08122 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.45□□□□□ -0.1
Col4a2P08122 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col4a2P08122 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a2P08122 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.44□□□□□ -0.1
Col4a2P08122 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Col4a2P08122 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.44□□□□□ -0.1
Col4a2P08122 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a2P08122 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.44□□□□□ -0.1
Col4a2P08122 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col4a2P08122 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Col4a2P08122 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a2P08122 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a2P08122 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a2P08122 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.44□□□□□ -0.1
Col4a2P08122 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Col4a2P08122 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Col4a2P08122 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a2P08122 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Gm22175-201ENSMUST00000175007 78 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.43□□□□□ -0.1
Col4a2P08122 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a2P08122 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.42□□□□□ -0.1
Col4a2P08122 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col4a2P08122 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col4a2P08122 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms