Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PrnpP04925 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
PrnpP04925 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.18■□□□□ 0.18
PrnpP04925 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PrnpP04925 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.18■□□□□ 0.18
PrnpP04925 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.18■□□□□ 0.18
PrnpP04925 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.18■□□□□ 0.18
PrnpP04925 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PrnpP04925 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.18■□□□□ 0.18
PrnpP04925 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.18■□□□□ 0.18
PrnpP04925 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrnpP04925 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.17■□□□□ 0.18
PrnpP04925 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
PrnpP04925 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.17■□□□□ 0.18
PrnpP04925 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PrnpP04925 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.17■□□□□ 0.18
PrnpP04925 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.17■□□□□ 0.18
PrnpP04925 Gm8318-201ENSMUST00000182954 872 ntBASIC16.17■□□□□ 0.18
PrnpP04925 Mir6990-201ENSMUST00000183724 91 ntBASIC16.17■□□□□ 0.18
PrnpP04925 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.17■□□□□ 0.18
PrnpP04925 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PrnpP04925 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.17■□□□□ 0.18
PrnpP04925 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PrnpP04925 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PrnpP04925 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PrnpP04925 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Gm14722-201ENSMUST00000118943 689 ntBASIC16.16■□□□□ 0.18
PrnpP04925 AA543401-201ENSMUST00000164248 1269 ntBASIC16.16■□□□□ 0.18
PrnpP04925 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.16■□□□□ 0.18
PrnpP04925 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.16■□□□□ 0.18
PrnpP04925 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.16■□□□□ 0.18
PrnpP04925 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PrnpP04925 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PrnpP04925 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.15■□□□□ 0.18
PrnpP04925 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PrnpP04925 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PrnpP04925 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PrnpP04925 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.15■□□□□ 0.18
PrnpP04925 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.15■□□□□ 0.18
PrnpP04925 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Gm18889-201ENSMUST00000174284 929 ntBASIC16.15■□□□□ 0.18
PrnpP04925 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PrnpP04925 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.15■□□□□ 0.18
PrnpP04925 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.15■□□□□ 0.18
PrnpP04925 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms