Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.35■□□□□ 0.21
P04214 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.35■□□□□ 0.21
P04214 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04214 Rarb-207ENSMUST00000225921 2756 ntBASIC16.35■□□□□ 0.21
P04214 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04214 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04214 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04214 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
P04214 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
P04214 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
P04214 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
P04214 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.34■□□□□ 0.21
P04214 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.34■□□□□ 0.21
P04214 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.34■□□□□ 0.21
P04214 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04214 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04214 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
P04214 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Gm14722-201ENSMUST00000118943 689 ntBASIC16.33■□□□□ 0.2
P04214 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.33■□□□□ 0.2
P04214 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.33■□□□□ 0.2
P04214 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.33■□□□□ 0.2
P04214 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
P04214 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.33■□□□□ 0.2
P04214 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
P04214 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
P04214 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.33■□□□□ 0.2
P04214 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
P04214 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
P04214 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04214 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04214 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.32■□□□□ 0.2
P04214 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
P04214 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04214 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P04214 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.32■□□□□ 0.2
P04214 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.32■□□□□ 0.2
P04214 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04214 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.31■□□□□ 0.2
P04214 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.31■□□□□ 0.2
P04214 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
P04214 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P04214 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Gm6415-201ENSMUST00000118488 348 ntBASIC16.31■□□□□ 0.2
P04214 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.31■□□□□ 0.2
P04214 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.31■□□□□ 0.2
P04214 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.31■□□□□ 0.2
P04214 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.31■□□□□ 0.2
P04214 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
P04214 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04214 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04214 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P04214 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04214 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.3■□□□□ 0.2
P04214 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04214 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
P04214 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04214 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
P04214 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms