Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa3P02831 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa3P02831 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Gm12497-201ENSMUST00000138778 237 ntBASIC13.13□□□□□ -0.31
Hoxa3P02831 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.13□□□□□ -0.31
Hoxa3P02831 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa3P02831 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Gm11780-201ENSMUST00000136880 516 ntBASIC13.12□□□□□ -0.31
Hoxa3P02831 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa3P02831 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Hoxa3P02831 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hoxa3P02831 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa3P02831 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.11□□□□□ -0.31
Hoxa3P02831 Gm9172-201ENSMUST00000212092 954 ntBASIC13.11□□□□□ -0.31
Hoxa3P02831 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa3P02831 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Hoxa3P02831 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms