Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.68□□□□□ -0.06
IghmP01872 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.68□□□□□ -0.06
IghmP01872 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.68□□□□□ -0.06
IghmP01872 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.68□□□□□ -0.06
IghmP01872 Gm27742-201ENSMUST00000184667 60 ntBASIC14.68□□□□□ -0.06
IghmP01872 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Gm44454-201ENSMUST00000198541 138 ntBASIC14.68□□□□□ -0.06
IghmP01872 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IghmP01872 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
IghmP01872 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IghmP01872 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
IghmP01872 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IghmP01872 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.67□□□□□ -0.06
IghmP01872 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IghmP01872 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm8825-201ENSMUST00000182565 998 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm4518-201ENSMUST00000182638 718 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm9172-201ENSMUST00000212092 954 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.67□□□□□ -0.06
IghmP01872 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.67□□□□□ -0.06
IghmP01872 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.67□□□□□ -0.06
IghmP01872 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.67□□□□□ -0.06
IghmP01872 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
IghmP01872 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IghmP01872 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
IghmP01872 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
IghmP01872 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.66□□□□□ -0.06
IghmP01872 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.66□□□□□ -0.06
IghmP01872 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
IghmP01872 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
IghmP01872 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms