Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
TcraP01849 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TcraP01849 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.48□□□□□ -0.57
TcraP01849 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Gm29257-201ENSMUST00000186115 639 ntBASIC11.48□□□□□ -0.57
TcraP01849 Gm37292-201ENSMUST00000192062 758 ntBASIC11.48□□□□□ -0.57
TcraP01849 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.48□□□□□ -0.57
TcraP01849 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TcraP01849 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TcraP01849 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TcraP01849 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TcraP01849 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.47□□□□□ -0.57
TcraP01849 Gm24841-201ENSMUST00000158676 357 ntBASIC11.47□□□□□ -0.57
TcraP01849 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TcraP01849 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TcraP01849 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
TcraP01849 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
TcraP01849 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TcraP01849 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TcraP01849 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TcraP01849 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TcraP01849 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
TcraP01849 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Gm12527-201ENSMUST00000117967 564 ntBASIC11.46□□□□□ -0.57
TcraP01849 Gm17661-201ENSMUST00000170317 270 ntBASIC11.46□□□□□ -0.57
TcraP01849 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.46□□□□□ -0.57
TcraP01849 Gm43183-201ENSMUST00000200632 547 ntBASIC11.46□□□□□ -0.57
TcraP01849 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
TcraP01849 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.46□□□□□ -0.57
TcraP01849 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TcraP01849 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
TcraP01849 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TcraP01849 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
TcraP01849 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TcraP01849 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms