Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01734 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.03■□□□□ 0.32
P01734 Gm15358-201ENSMUST00000119249 520 ntBASIC17.03■□□□□ 0.32
P01734 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.03■□□□□ 0.32
P01734 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P01734 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.03■□□□□ 0.32
P01734 AV026068-213ENSMUST00000223675 1171 ntBASIC17.03■□□□□ 0.32
P01734 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Gm15590-201ENSMUST00000078419 552 ntBASIC17.03■□□□□ 0.32
P01734 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
P01734 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01734 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.02■□□□□ 0.32
P01734 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.02■□□□□ 0.32
P01734 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
P01734 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
P01734 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01734 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.02■□□□□ 0.31
P01734 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
P01734 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
P01734 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
P01734 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01734 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P01734 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.01■□□□□ 0.31
P01734 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
P01734 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.01■□□□□ 0.31
P01734 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.01■□□□□ 0.31
P01734 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P01734 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P01734 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.01■□□□□ 0.31
P01734 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.01■□□□□ 0.31
P01734 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01734 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Gm5682-201ENSMUST00000173402 505 ntBASIC17■□□□□ 0.31
P01734 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17■□□□□ 0.31
P01734 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01734 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P01734 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
P01734 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
P01734 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms