Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp1O89090 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp1O89090 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sp1O89090 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp1O89090 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sp1O89090 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.81■□□□□ 0.12
Sp1O89090 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.81■□□□□ 0.12
Sp1O89090 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.81■□□□□ 0.12
Sp1O89090 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.81■□□□□ 0.12
Sp1O89090 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sp1O89090 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.81■□□□□ 0.12
Sp1O89090 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Gm7787-201ENSMUST00000216858 688 ntBASIC15.81■□□□□ 0.12
Sp1O89090 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.81■□□□□ 0.12
Sp1O89090 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sp1O89090 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp1O89090 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sp1O89090 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.8■□□□□ 0.12
Sp1O89090 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Gm14494-201ENSMUST00000118786 435 ntBASIC15.8■□□□□ 0.12
Sp1O89090 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.8■□□□□ 0.12
Sp1O89090 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sp1O89090 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sp1O89090 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sp1O89090 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp1O89090 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Gm11594-201ENSMUST00000122313 162 ntBASIC15.79■□□□□ 0.12
Sp1O89090 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.79■□□□□ 0.12
Sp1O89090 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.79■□□□□ 0.12
Sp1O89090 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.79■□□□□ 0.12
Sp1O89090 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp1O89090 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sp1O89090 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sp1O89090 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.78■□□□□ 0.12
Sp1O89090 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp1O89090 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.78■□□□□ 0.12
Sp1O89090 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms