Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.12□□□□□ -0.63
Sh2d1aO88890 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.12□□□□□ -0.63
Sh2d1aO88890 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.11□□□□□ -0.63
Sh2d1aO88890 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.11□□□□□ -0.63
Sh2d1aO88890 Gm17808-201ENSMUST00000200859 894 ntBASIC11.11□□□□□ -0.63
Sh2d1aO88890 Gm44430-201ENSMUST00000203376 995 ntBASIC11.11□□□□□ -0.63
Sh2d1aO88890 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh2d1aO88890 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.1□□□□□ -0.63
Sh2d1aO88890 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Gm11950-201ENSMUST00000121615 838 ntBASIC11.1□□□□□ -0.63
Sh2d1aO88890 AA414768-201ENSMUST00000121924 1257 ntBASIC11.1□□□□□ -0.63
Sh2d1aO88890 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.1□□□□□ -0.63
Sh2d1aO88890 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms