Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hcn3O88705 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.04■□□□□ -0
Hcn3O88705 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.04■□□□□ -0
Hcn3O88705 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.04■□□□□ -0
Hcn3O88705 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.04■□□□□ -0
Hcn3O88705 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Hcn3O88705 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.04■□□□□ -0
Hcn3O88705 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn3O88705 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.03■□□□□ -0
Hcn3O88705 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Hcn3O88705 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.03■□□□□ -0
Hcn3O88705 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.03■□□□□ -0
Hcn3O88705 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Hcn3O88705 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn3O88705 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.02■□□□□ -0
Hcn3O88705 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.02■□□□□ -0
Hcn3O88705 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn3O88705 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.02□□□□□ -0.01
Hcn3O88705 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn3O88705 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Hcn3O88705 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hcn3O88705 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.01□□□□□ -0.01
Hcn3O88705 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn3O88705 Gm44450-201ENSMUST00000199528 114 ntBASIC15.01□□□□□ -0.01
Hcn3O88705 Gm18959-201ENSMUST00000208954 655 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms