Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.05■□□□□ 0.48
Sema3fO88632 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sema3fO88632 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sema3fO88632 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sema3fO88632 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sema3fO88632 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sema3fO88632 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Sema3fO88632 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Sema3fO88632 Gm14822-201ENSMUST00000122247 291 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Gm18489-201ENSMUST00000172565 551 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Mir3113-201ENSMUST00000175478 76 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.04■□□□□ 0.48
Sema3fO88632 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sema3fO88632 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sema3fO88632 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sema3fO88632 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sema3fO88632 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sema3fO88632 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sema3fO88632 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.03■□□□□ 0.48
Sema3fO88632 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sema3fO88632 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.03■□□□□ 0.48
Sema3fO88632 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sema3fO88632 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sema3fO88632 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.03■□□□□ 0.48
Sema3fO88632 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
Sema3fO88632 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sema3fO88632 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.03■□□□□ 0.48
Sema3fO88632 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sema3fO88632 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sema3fO88632 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sema3fO88632 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sema3fO88632 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.02■□□□□ 0.48
Sema3fO88632 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.02■□□□□ 0.48
Sema3fO88632 Gm17968-201ENSMUST00000194902 784 ntBASIC18.02■□□□□ 0.48
Sema3fO88632 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sema3fO88632 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.02■□□□□ 0.48
Sema3fO88632 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.02■□□□□ 0.48
Sema3fO88632 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sema3fO88632 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.02■□□□□ 0.47
Sema3fO88632 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sema3fO88632 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sema3fO88632 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sema3fO88632 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sema3fO88632 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sema3fO88632 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sema3fO88632 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.01■□□□□ 0.47
Sema3fO88632 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.01■□□□□ 0.47
Sema3fO88632 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Mir8117-201ENSMUST00000184773 107 ntBASIC18.01■□□□□ 0.47
Sema3fO88632 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.01■□□□□ 0.47
Sema3fO88632 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.01■□□□□ 0.47
Sema3fO88632 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sema3fO88632 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sema3fO88632 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Sema3fO88632 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sema3fO88632 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sema3fO88632 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms