Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Gm2423-201ENSMUST00000074863 733 ntBASIC17.05■□□□□ 0.32
Slc6a20bO88575 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gm13823-201ENSMUST00000119930 345 ntBASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.04■□□□□ 0.32
Slc6a20bO88575 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gm27618-201ENSMUST00000183671 60 ntBASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gm27306-201ENSMUST00000183970 107 ntBASIC17.04■□□□□ 0.32
Slc6a20bO88575 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Slc6a20bO88575 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc6a20bO88575 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Slc6a20bO88575 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.02■□□□□ 0.32
Slc6a20bO88575 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a20bO88575 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Slc6a20bO88575 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a20bO88575 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a20bO88575 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a20bO88575 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a20bO88575 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.01■□□□□ 0.31
Slc6a20bO88575 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a20bO88575 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms