Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.51□□□□□ -0.09
Cops4O88544 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cops4O88544 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.5□□□□□ -0.09
Cops4O88544 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cops4O88544 Gm37055-201ENSMUST00000191866 133 ntBASIC14.5□□□□□ -0.09
Cops4O88544 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.5□□□□□ -0.09
Cops4O88544 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Gm18115-201ENSMUST00000221209 621 ntBASIC14.5□□□□□ -0.09
Cops4O88544 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops4O88544 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops4O88544 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cops4O88544 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cops4O88544 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.49□□□□□ -0.09
Cops4O88544 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.49□□□□□ -0.09
Cops4O88544 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Gm2274-201ENSMUST00000184539 609 ntBASIC14.49□□□□□ -0.09
Cops4O88544 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.49□□□□□ -0.09
Cops4O88544 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.49□□□□□ -0.09
Cops4O88544 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.49□□□□□ -0.09
Cops4O88544 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cops4O88544 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops4O88544 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.48□□□□□ -0.09
Cops4O88544 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.48□□□□□ -0.09
Cops4O88544 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.48□□□□□ -0.09
Cops4O88544 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.48□□□□□ -0.09
Cops4O88544 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.48□□□□□ -0.09
Cops4O88544 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.48□□□□□ -0.09
Cops4O88544 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.48□□□□□ -0.09
Cops4O88544 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms