Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1hO88427 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.16■□□□□ 0.02
Cacna1hO88427 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.16■□□□□ 0.02
Cacna1hO88427 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.16■□□□□ 0.02
Cacna1hO88427 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1hO88427 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Asic1-205ENSMUST00000228185 1818 ntBASIC15.15■□□□□ 0.02
Cacna1hO88427 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Gm14042-201ENSMUST00000120139 833 ntBASIC15.15■□□□□ 0.02
Cacna1hO88427 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.15■□□□□ 0.02
Cacna1hO88427 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.15■□□□□ 0.02
Cacna1hO88427 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1hO88427 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.14■□□□□ 0.01
Cacna1hO88427 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Gm43703-201ENSMUST00000200523 763 ntBASIC15.14■□□□□ 0.01
Cacna1hO88427 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.14■□□□□ 0.01
Cacna1hO88427 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.14■□□□□ 0.01
Cacna1hO88427 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1hO88427 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms