Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gm44335-201ENSMUST00000196879 141 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gm44297-201ENSMUST00000198304 141 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gm44346-201ENSMUST00000198851 141 ntBASIC14.85□□□□□ -0.03
Tgfbr3O88393 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Tgfbr3O88393 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Gm5312-201ENSMUST00000203728 547 ntBASIC14.84□□□□□ -0.03
Tgfbr3O88393 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.84□□□□□ -0.03
Tgfbr3O88393 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tgfbr3O88393 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.84□□□□□ -0.03
Tgfbr3O88393 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tgfbr3O88393 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tgfbr3O88393 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tgfbr3O88393 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tgfbr3O88393 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Tgfbr3O88393 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Gm11745-201ENSMUST00000121669 448 ntBASIC14.83□□□□□ -0.04
Tgfbr3O88393 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Gm18246-201ENSMUST00000221023 728 ntBASIC14.83□□□□□ -0.04
Tgfbr3O88393 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.83□□□□□ -0.04
Tgfbr3O88393 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 AA543401-201ENSMUST00000164248 1269 ntBASIC14.82□□□□□ -0.04
Tgfbr3O88393 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Thap2-203ENSMUST00000218989 527 ntBASIC14.82□□□□□ -0.04
Tgfbr3O88393 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms