Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 App-207ENSMUST00000227737 2827 ntBASIC14.99□□□□□ -0.01
Vti1bO88384 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vti1bO88384 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vti1bO88384 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Gm29518-201ENSMUST00000190858 372 ntBASIC14.98□□□□□ -0.01
Vti1bO88384 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vti1bO88384 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vti1bO88384 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vti1bO88384 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vti1bO88384 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1bO88384 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.97□□□□□ -0.01
Vti1bO88384 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.97□□□□□ -0.01
Vti1bO88384 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vti1bO88384 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.96□□□□□ -0.01
Vti1bO88384 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.96□□□□□ -0.01
Vti1bO88384 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Gm17808-201ENSMUST00000200859 894 ntBASIC14.96□□□□□ -0.01
Vti1bO88384 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vti1bO88384 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1bO88384 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1bO88384 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.95□□□□□ -0.02
Vti1bO88384 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.95□□□□□ -0.02
Vti1bO88384 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Gm11950-201ENSMUST00000121615 838 ntBASIC14.95□□□□□ -0.02
Vti1bO88384 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.95□□□□□ -0.02
Vti1bO88384 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms