Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.23■□□□□ 0.83
Nid2O88322 Gm29541-201ENSMUST00000191351 678 ntBASIC20.23■□□□□ 0.83
Nid2O88322 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.23■□□□□ 0.83
Nid2O88322 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nid2O88322 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.23■□□□□ 0.83
Nid2O88322 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nid2O88322 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nid2O88322 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nid2O88322 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.22■□□□□ 0.83
Nid2O88322 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.22■□□□□ 0.83
Nid2O88322 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.22■□□□□ 0.83
Nid2O88322 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nid2O88322 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Nid2O88322 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nid2O88322 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nid2O88322 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.21■□□□□ 0.83
Nid2O88322 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.21■□□□□ 0.83
Nid2O88322 Gm13823-201ENSMUST00000119930 345 ntBASIC20.21■□□□□ 0.83
Nid2O88322 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Nid2O88322 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nid2O88322 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.2■□□□□ 0.82
Nid2O88322 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.2■□□□□ 0.82
Nid2O88322 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
Nid2O88322 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.2■□□□□ 0.82
Nid2O88322 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nid2O88322 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nid2O88322 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nid2O88322 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.19■□□□□ 0.82
Nid2O88322 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nid2O88322 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.19■□□□□ 0.82
Nid2O88322 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.19■□□□□ 0.82
Nid2O88322 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Gm13015-201ENSMUST00000118674 204 ntBASIC20.19■□□□□ 0.82
Nid2O88322 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.19■□□□□ 0.82
Nid2O88322 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.19■□□□□ 0.82
Nid2O88322 Gm43767-201ENSMUST00000198933 381 ntBASIC20.19■□□□□ 0.82
Nid2O88322 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.19■□□□□ 0.82
Nid2O88322 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC20.19■□□□□ 0.82
Nid2O88322 Gm6888-201ENSMUST00000221983 706 ntBASIC20.19■□□□□ 0.82
Nid2O88322 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nid2O88322 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.18■□□□□ 0.82
Nid2O88322 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nid2O88322 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms