Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Kcnu1O54982 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Kcnu1O54982 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Kcnu1O54982 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Gm27867-201ENSMUST00000184778 125 ntBASIC16.69■□□□□ 0.26
Kcnu1O54982 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Kcnu1O54982 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Kcnu1O54982 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Kcnu1O54982 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm8825-201ENSMUST00000182565 998 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm4518-201ENSMUST00000182638 718 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.68■□□□□ 0.26
Kcnu1O54982 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Kcnu1O54982 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Kcnu1O54982 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Kcnu1O54982 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Gm15165-201ENSMUST00000118140 502 ntBASIC16.67■□□□□ 0.26
Kcnu1O54982 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Kcnu1O54982 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Kcnu1O54982 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.67■□□□□ 0.26
Kcnu1O54982 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Kcnu1O54982 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Kcnu1O54982 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms