Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.85■□□□□ 0.29
Nr1i3O35627 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.84■□□□□ 0.29
Nr1i3O35627 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.84■□□□□ 0.29
Nr1i3O35627 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.84■□□□□ 0.29
Nr1i3O35627 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Gm14722-201ENSMUST00000118943 689 ntBASIC16.84■□□□□ 0.29
Nr1i3O35627 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.84■□□□□ 0.29
Nr1i3O35627 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1i3O35627 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Nr1i3O35627 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nr1i3O35627 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nr1i3O35627 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Nr1i3O35627 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Olfr129-201ENSMUST00000122318 993 ntBASIC16.83■□□□□ 0.28
Nr1i3O35627 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nr1i3O35627 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1i3O35627 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.82■□□□□ 0.28
Nr1i3O35627 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Nr1i3O35627 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1i3O35627 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Gm27742-201ENSMUST00000184667 60 ntBASIC16.81■□□□□ 0.28
Nr1i3O35627 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.81■□□□□ 0.28
Nr1i3O35627 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms