Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.29■□□□□ 0.04
Npc1O35604 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.29■□□□□ 0.04
Npc1O35604 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Npc1O35604 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.29■□□□□ 0.04
Npc1O35604 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.29■□□□□ 0.04
Npc1O35604 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Npc1O35604 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Npc1O35604 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.29■□□□□ 0.04
Npc1O35604 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Npc1O35604 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Npc1O35604 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Npc1O35604 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.28■□□□□ 0.04
Npc1O35604 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Gm44357-201ENSMUST00000195897 142 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm19658-201ENSMUST00000196231 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44367-201ENSMUST00000196836 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44350-201ENSMUST00000197197 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44390-201ENSMUST00000197533 144 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44313-201ENSMUST00000198018 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44486-201ENSMUST00000198508 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44314-201ENSMUST00000199263 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44394-201ENSMUST00000199558 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44484-201ENSMUST00000199873 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44466-201ENSMUST00000200264 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 Gm44359-201ENSMUST00000200671 138 ntBASIC15.28■□□□□ 0.04
Npc1O35604 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.28■□□□□ 0.04
Npc1O35604 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Npc1O35604 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Npc1O35604 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Npc1O35604 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.27■□□□□ 0.04
Npc1O35604 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Npc1O35604 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.27■□□□□ 0.04
Npc1O35604 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.27■□□□□ 0.04
Npc1O35604 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Npc1O35604 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Npc1O35604 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.27■□□□□ 0.03
Npc1O35604 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Npc1O35604 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Npc1O35604 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Npc1O35604 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Npc1O35604 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Npc1O35604 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Npc1O35604 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.26■□□□□ 0.03
Npc1O35604 Gm8097-201ENSMUST00000117903 829 ntBASIC15.26■□□□□ 0.03
Npc1O35604 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms